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ID BPV1 standard; DNA; VRL; 7945 BP.
XX
AC X02346; J02044; M24622; X00473;
XX
DT 01-JUL-1995 (Rel. 11, Created)
DT 01-JUL-1995 (Rel. 12, Last updated, Version 1)
XX
DE Bovine papillomavirus type 1 (BPV-1) genome - complete.
XX
KW cloning vector.
XX
OS Bovine papillomavirus
OC Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
OC Papillomavirus.
XX
RN [1]
RP 1-7945
RX MEDLINE; 83012974.
RA Chen E.Y., Howley P.M., Levinson A.D., Seeburg P.H.;
RT "The primary structure and genetic organization of the bovine
RT papillomavirus type 1 genome";
RL Nature 299:529-534(1982).
XX
RN [2]
RP 7120-7399
RX MEDLINE; 87246504.
RA Baker C.C., Howley P.M.;
RT "Differential promoter utilization by the bovine papillomavirus in
RT transformed cells and productively infected wart tissues";
RL EMBO J. 6:1027-1035(1987).
XX
CC NM (BPV-1)
CC CM (yes)
CC NA (ds-DNA)
CC TP (linear)
CC ST ()
CC TY (virus)
CC SP ()
CC HO (cow)
CC CP ()
CC FN (cloning)
CC SE ()
CC PA (cow)
CC BR ()
CC OF ()
CC OR ()
XX
FH Key Location/Qualifiers
FH
FT misc_feature 0..0
FT /note="1. cow
FT -> BPV-1 7945bp [bovine papillomavirus type 1]"
FT repeat_unit 37..47
FT /note="inverted repeat A"
FT promoter 58..63
FT /note="TATA sequence"
FT misc_feature 89..91
FT /note="pot. cap site"
FT misc_feature 182..183
FT /note="pot. splice site"
FT promoter 4072..4077
FT /note="TATA sequence"
FT misc_feature 4150..4150
FT /note="pot. open reading frame start site"
FT CDS 4171..7092
FT /note="put. open reading frame"
FT misc_feature 4179..4183
FT /note="polyadenylation signal"
FT promoter 5089..5094
FT /note="TATA sequence"
FT promoter 6859..6864
FT /note="TATA sequence"
FT repeat_unit 7068..7081
FT /note="inverted repeat B"
FT polyA_site 7083..7083
FT /note="pot. polyadenylation site"
FT repeat_unit 7089..7098
FT /note="inverted repeat C"
FT repeat_unit 7098..7108
FT /note="inverted repeat D"
FT promoter 7108..7113
FT /note="TATA sequence"
FT misc_RNA 7131..7133
FT /note="pot. cap site"
FT misc_feature 7137..7138
FT /note="pot. splice site"
FT repeat_unit 7139..7152
FT /note="inverted repeat E"
FT repeat_unit 7241..7253
FT /note="inverted repeat E'"
FT repeat_unit 7331..7341
FT /note="inverted repeat D'"
FT repeat_unit 7435..7444
FT /note="inverted repeat C'"
FT repeat_unit 7568..7581
FT /note="inverted repeat B"
FT repeat_unit 7596..7606
FT /note="inverted repeat F"
FT repeat_unit 7872..7882
FT /note="inverted repeat F'"
FT repeat_unit 7921..7931
FT /note="inverted repeat A'"
XX
SQ Sequence 7945 BP; 2270 A; 1713 C; 1887 G; 2074 T; 1 other;
gttaacaata atcacaccat caccgttttt tcaagcggga aaaaatagcc agctaactat
aaaaagctgc tgacagaccc cggttttcac atggacctga aaccttttgc aagaaccaat
ccattctcag ggttggattg tctgtggtgc agagagcctc ttacagaagt tgatgctttt
aggtgcatgg tcaaagactt tcatgttgta attcgggaag gctgtagata tggtgcatgt
accatttgtc ttgaaaactg tttagctact gaaagaagac tttggcaagg tgttccagta
acaggtgagg aagctgaatt attgcatggc aaaacacttg ataggctttg cataagatgc
tgctactgtg ggggcaaact aacaaaaaat gaaaaacatc ggcatgtgct ttttaatgag
cctttctgca aaaccagagc taacataatt agaggacgct gctacgactg ctgcagacat
ggttcaaggt ccaaataccc atagaaactt ggatgattca cctgcaggac cgttgctgat
tttaagtcca tgtgcaggca cacctaccag gtctcctgca gcacctgatg cacctgattt
cagacttccg tgccatttcg gccgtcctac taggaagcga ggtcccacta cccctccgct
ttcctctccc ggaaaactgt gtgcaacagg gccacgtcga gtgtattctg tgactgtctg
ctgtggaaac tgcggaaaag agctgacttt tgctgtgaag accagctcga cgtccctgct
tggatttgaa caccttttaa actcagattt agacctcttg tgtccacgtt gtgaatctcg
cgagcgtcat ggcaaacgat aaaggtagca attgggattc gggcttggga tgctcatatc
tgctgactga ggcagaatgt gaaagtgaca aagagaatga ggaacccggg gcaggtgtag
aactgtctgt ggaatctgat cggtatgata gccaggatga ggattttgtt gacaatgcat
cagtctttca gggaaatcac ctggaggtct tccaggcatt agagaaaaag gcgggtgagg
agcagatttt aaatttgaaa agaaaagtat tggggagttc gcaaaacagc agcggttccg
aagcatctga aactccagtt aaaagacgga aatcaggagc aaagcgaaga ttatttgctg
aaaangaagc taaccgtgtt cttacgcccc tccaggtaca gggggagggg gaggggaggc
aagaacttaa tgaggagcag gcaattagtc atctacatct gcagcttgtt aaatctaaaa
atgctacagt ttttaagctg gggctcttta aatctttgtt cctttgtagc ttccatgata
ttacgaggtt gtttaagaat gataagacca ctaatcagca atgggtgctg gctgtgtttg
gccttgcaga ggtgtttttt gaggcgagtt tcgaactcct aaagaagcag tgtagttttc
tgcagatgca aaaaagatct catgaaggag gaacttgtgc agtttactta atctgcttta
acacagctaa aagcagagaa acagtccgga atctgatggc aaacacgcta aatgtaagag
aagagtgttt gatgctgcag ccagctaaaa ttcgaggact cagcgcagct ctattctggt
ttaaaagtag tttgtcaccc gctacactta aacatggtgc tttacctgag tggatacggg
cgcaaactac tctgaacgag agcttgcaga ccgagaaatt cgacttcgga actatggtgc
aatgggccta tgatcacaaa tatgctgagg agtctaaaat agcctatgaa tatgctttgg
ctgcaggatc tgatagcaat gcacgggctt ttttagcaac taacagccaa gctaagcatg
tgaaggactg tgcaactatg gtaagacact atctaagagc tgaaacacaa gcattaagca
tgcctgcata tattaaagct aggtgcaagc tggcaactgg ggaaggaagc tggaagtcta
tcctaacttt ttttaactat cagaatattg aattaattac ctttattaat gctttaaagc
tctggctaaa aggaattcca aaaaaaaact gtttagcatt tattggccct ccaaacacag
gcaagtctat gctctgcaac tcattaattc attttttggg tggtagtgtt ttatcttttg
ccaaccataa aagtcacttt tggcttgctt ccctagcaga tactagagct gctttagtag
atgatgctac tcatgcttgc tggaggtact ttgacacata cctcagaaat gcattggatg
gctaccctgt cagtattgat agaaaacaca aagcagcggt tcaaattaaa gctccacccc
tcctggtaac cagtaatatt gatgtgcagg cagaggacag atatttgtac ttgcatagtc
gggtgcaaac ctttcgcttt gagcagccat gcacagatga atcgggtgag caacctttta
atattactga tgcagattgg aaatcttttt ttgtaaggtt atgggggcgt ttagacctga
ttgacgagga ggaggatagt gaagaggatg gagacagcat gcgaacgttt acatgtagcg
caagaaacac aaatgcagtt gattgagaaa agtagtgata agttgcaaga tcatatactg
tactggactg ctgttagaac tgagaacaca ctgctttatg ctgcaaggaa aaaaggggtg
actgtcctag gacactgcag agtaccacac tctgtagttt gtcaagagag agccaagcag
gccattgaaa tgcagttgtc tttgcaggag ttaagcaaaa ctgagtttgg ggatgaacca
tggtctttgc ttgacacaag ctgggaccga tatatgtcag aacctaaacg gtgctttaag
aaaggcgcca gggtggtaga ggtggagttt gatggaaatg caagcaatac aaactggtac
actgtctaca gcaatttgta catgcgcaca gaggacggct ggcagcttgc gaaggctggg
gctgacggaa ctgggctcta ctactgcacc atggccggtg ctggacgcat ttactattct
cgctttggtg acgaggcagc cagatttagt acaacagggc attactctgt aagagatcag
gacagagtgt atgctggtgt ctcatccacc tcttctgatt ttagagatcg cccagacgga
gtctgggtcg catccgaagg acctgaagga gaccctgcag gaaaagaagc cgagccagcc
cagcctgtct cttctttgct cggctccccc gcctgcggtc ccatcagagc aggcctcggt
tgggtacggg acggtcctcg ctcgcacccc tacaattttc ctgcaggctc ggggggctct
attctccgct cttcctccac cccgtgcagg gcacggtacc ggtggacttg gcatcaaggc
aggaagaaga ggagcagtcg cccgactcca cagaggaaga accagtgact ctcccaaggc
gcaccaccaa tgatggattc cacctgttaa aggcaggagg gtcatgcttt gctctaattt
caggaactgc taaccaggta aagtgctatc gctttcgggt gaaaaagaac catagacatc
gctacgagaa ctgcaccacc acctggttca cagttgctga caacggtgct gaaagacaag
gacaagcaca aatactgatc acctttggat cgccaagtca aaggcaagac tttctgaaac
atgtaccact acctcctgga atgaacattt ccggctttac agccagcttg gacttctgat
cactgccatt gccttttctt catctgactg gtgtactatg ccaaatctat ggtttctatt
gttcttggga ctagttgctg caatgcaact gctgctatta ctgttcttac tcttgttttt
tcttgtatac tgggatcatt ttgagtgctc ctgtacaggt ctgccctttt aatgccttta
catcactggc tattggctgt gtttttactg ttgtgtggat ttgatttgtt ttatatactg
tatgaagttt tttcatttgt gcttgtattg ctgtttgtaa gttttttact agagtttgta
ttccccctgc tcagatttta tatggtttaa gctgcagcaa taaaaatgag tgcacgaaaa
agagtaaaac gtgccagtgc ctatgacctg tacaggacat gcaagcaagc gggcacatgt
ccaccagatg tgataccaaa ggtagaagga gatactatag cagataaaat tttgaaattt
gggggtcttg caatctactt aggagggcta ggaataggaa catggtctac tggaagggtt
gctgcaggtg gatcaccaag gtacacacca ctccgaacag cagggtccac atcatcgctt
gcatcaatag gatccagagc tgtaacagca gggacccgcc ccagtatagg tgcgggcatt
cctttagaca cccttgaaac tcttggggcc ttgcgtccag gggtgtatga ggacactgtg
ctaccagagg cccctgcaat agtcactcct gatgctgttc ctgcagattc agggcttgat
gccctgtcca taggtacaga ctcgtccacg gagaccctca ttactctgct agagcctgag
ggtcccgagg acatagcggt tcttgagctg caacccctgg accgtccaac ttggcaagta
agcaatgctg ttcatcagtc ctctgcatac cacgcccctc tgcagctgca atcgtccatt
gcagaaacat ctggtttaga aaatattttt gtaggaggct cgggtttagg ggatacagga
ggagaaaaca ttgaactgac atacttcggg tccccacgaa caagcacgcc ccgcagtatt
gcctctaaat cacgtggcat tttaaactgg ttcagtaaac ggtactacac acaggtgccc
acggaagatc ctgaagtgtt ttcatcccaa acatttgcaa acccactgta tgaagcagaa
ccagctgtgc ttaagggacc tagtggacgt gttggactca gtcaggttta taaacctgat
acacttacaa cacgtagcgg gacagaggtg ggaccacagc tacatgtcag gtactcattg
agtactatac atgaagatgt agaagcaatc ccctacacag ttgatgaaaa tacacaggga
cttgcattcg tacccttgca tgaagagcaa gcaggttttg aggagataga attagatgat
tttagtgaga cacatagact gctacctcag aacacctctt ctacacctgt tggtagtggt
gtacgaagaa gcctcattcc aactcaggaa tttagtgcaa cacggcctac aggtgttgta
acctatggct cacctgacac ttactctgct agcccagtta ctgaccctga ttctacctct
cctagtctag ttatcgatga cactactact acaccaatca ttataattga tgggcacaca
gttgatttgt acagcagtaa ctacaccttg catccctcct tgttgaggaa acgaaaaaaa
cggaaacatg cctaattttt tttgcagatg gcgttgtggc aacaaggcca gaagctgtat
ctccctccaa cccctgtaag caaggtgctt tgcagtgaaa cctatgtgca aagaaaaagc
attttttatc atgcagaaac ggagcgcctg ctaactatag gacatccata ttacccagtg
tctatcgggg ccaaaactgt tcctaaggtc tctgcaaatc agtatagggt atttaaaata
caactacctg atcccaatca atttgcacta cctgacagga ctgttcacaa cccaagtaaa
gagcggctgg tgtgggcagt cataggtgtg caggtgtcca gagggcagcc tcttggaggt
actgtaactg ggcaccccac ttttaatgct ttgcttgatg cagaaaatgt gaatagaaaa
gtcaccaccc aaacaacaga tgacaggaaa caaacaggcc tagatgctaa gcaacaacag
attctgttgc taggctgtac ccctgctgaa ggggaatatt ggacaacagc ccgtccatgt
gttactgatc gtctagaaaa tggcgcctgc cctcctcttg aattaaaaaa caagcacata
gaagatgggg atatgatgga aattgggttt ggtgcagcca acttcaaaga aattaatgca
agtaaatcag atctacctct tgacattcaa aatgagatct gcttgtaccc agactacctc
aaaatggctg aggacgctgc tggtaatagc atgttctttt ttgcaaggaa agaacaggtg
tatgttagac acatctggac cagagggggc tcggagaaag aagcccctac cacagatttt
tatttaaaga ataataaagg ggatgccacc cttaaaatac ccagtgtgca ttttggtagt
cccagtggct cactagtctc aactgataat caaattttta atcggcccta ctggctattc
cgtgcccagg gcatgaacaa tggaattgca tggaataatt tattgttttt aacagtgggg
gacaatacac gtggtactaa tcttaccata agtgtagcct cagatggaac cccactaaca
gagtatgata gctcaaaatt caatgtatac catagacata tggaagaata taagctagcc
tttatattag agctatgctc tgtggaaatc acagctcaaa ctgtgtcaca tctgcaagga
cttatgccct ctgtgcttga aaattgggaa ataggtgtgc agcctcctac ctcatcgata
ttagaggaca cctatcgcta tatagagtct cctgcaacta aatgtgcaag caatgtaatt
cctgcaaaag aagaccctta tgcagggttt aagttttgga acatagatct taaagaaaag
ctttctttgg acttagatca atttcccttg ggaagaagat ttttagcaca gcaaggggca
ggatgttcaa ctgtgagaaa acgaagaatt agccaaaaaa cttccagtaa gcctgcaaaa
aaaaaaaaaa aataaaagct aagtttctat aaatgttctg taaatgtaaa acagaaggta
agtcaactgc acctaataaa aatcacttaa tagcaatgtg ctgtgtcagt tgtttattgg
aaccacaccc ggtacacatc ctgtccagca tttgcagtgc gtgcattgaa ttattgtgct
ggctagactt catggcgcct ggcaccgaat cctgccttct cagcgaaaat gaataattgc
tttgttggca agaaactaag catcaatggg acgcgtgcaa agcaccggcg gcggtagatg
cggggtaagt actgaatttt aattcgacct atcccggtaa agcgaaagcg acacgctttt
ttttcacaca tagcgggacc gaacacgtta taagtatcga ttaggtctat ttttgtctct
ctgtcggaac cagaactggt aaaagtttcc attgcgtctg ggcttgtcta tcattgcgtc
tctatggttt ttggaggatt agacggggcc accagtaatg gtgcatagcg gatgtctgta
ccgccatcgg tgcaccgata taggtttggg gctccccaag ggactgctgg gatgacagct
tcatattata ttgaatgggc gcataatcag cttaattggt gaggacaagc tacaagttgt
aacctgatct ccacaaagta cgttgccggt cggggtcaaa ccgtcttcgg tgctcgaaac
cgccttaaac tacagacagg tcccagccaa gtaggcggat caaaacctca aaaaggcggg
agccaatcaa aatgcagcat tatattttaa gctcaccgaa accggtaagt aaagactatg
tattttttcc cagtgaataa ttgtt
//