Return to this vector's summary.
Contributed by: thomas-haugen@uiowa.edu (Tom Haugen)
The sequence of pA10cat in your vector DB is incorrect. I don't know what
it is . For example, it has no CAT sequence. Here is my best guess of the
correct sequence from the paper.
DNA sequence pA10CAT-2 5638 b.p. complete sequence from Laimins et
al. J. Virol. 1984 : The sequence is not clear from the paper within pBR322 sequences adjacent
to the obliterated SphI and EcoRI sites.
LOCUS PA10CAT 5638 BP DNA PRELIMINARY
DEFINITION PA10CAT
BASE COUNT 1445 a 1412 c 1355 g 1426 t
1 aagctttttg caaaagccta ggcctccaaa aaagcctcct cactacttct ggaatagctc
61 agaggccgag gcggcctcgg cctctgcata aataaaaaaa attagtcagc catggggcgg
121 agaatgggcg gaactgggcg gagttagggg cgggatgggc ggagttaggg gcgggactat
181 ggttgctgac taattgagat gcagatctac cattccttgc ggcggcggtg ctcaacggcc
241 tcaacctact actgggctgc ttcctaatgc aggagtcgca taagggagag cgtcgaccga
301 tgcccttgag agccttcaac ccagtcagct ccttccggtg ggcgcggggc atgactatcg
361 tcgccgcact tatgactgtc ttctttatca tgcaactcgt aggacaggtg ccggcagcgc
421 tctgggtcat tttcggcgag gaccgctttc gctggagcgc gacgatgatc ggcctgtcgc
481 ttgcggtatt cggaatcttg cacgccctcg ctcaagcctt cgtcactggt cccgccacca
541 aacgtttcgg cgagaagcag gccattatcg ccggcatggc ggccgacgcg ctgggctacg
601 tcttgctggc gttcgcgacg cgaggctgga tggccttccc cattatgatt cttctcgctt
661 ccggcggcat cgggatgccc gcgttgcagg ccatgctgtc caggcaggta gatgacgacc
721 atcagggaca gcttcaagga tcgctcgcgg ctcttaccag cctaacttcg atcactggac
781 cgctgatcgt cacggcgatt tatgccgcct cggcgagcac atggaacggg ttggcatgga
841 ttgtaggcgc cgccctatac cttgtctgcc tccccgcgtt gcgtcgcggt gcatggagcc
901 gggccacctc gacctgaatg gaagccggcg gcacctcgct aacggattca ccactccaag
961 aattggagcc aatcaattct tgcggagaac tgtgaatgcg caaaccaacc cttggcagaa
1021 catatccatc gcgtccgcca tctccagcag ccgcacgcgg cgcatctcgg gcagcgttgg
1081 gtcctggcca cgggtgcgca tgatcgtgct cctgtcgttg aggacccggc taggctggcg
1141 gggttgcctt actggttagc agaatgaatc accgatacgc gagcgaacgt gaagcgactg
1201 ctgctgcaaa acgtctgcga cctgagcaac aacatgaatg gtcttcggtt tccgtgtttc
1261 gtaaagtctg gaaacgcgga agtcagcgcc ctgcaccatt atgttccgga tctgcatcgc
1321 aggatgctgc tggctaccct gtggaacacc tacatctgta ttaacgaagc gctggcattg
1381 accctgagtg atttttctct ggtcccgccg catccatacc gccagttgtt taccctcaca
1441 acgttccagt aaccgggcat gttcatcatc agtaacccgt atcgtgagca tcctctctcg
1501 tttcatcggt atcattaccc ccatgaacag aaattccccc ttacacggag gcatcaagtg
1561 accaaacagg aaaaaaccgc ccttaacatg gcccgcttta tcagaagcca gacattaacg
1621 cttctggaga aactcaacga gctggacgcg gatgaacagg cagacatctg tgaatcgctt
1681 cacgaccacg ctgatgagct ttaccgcagc tgcctcgcgc gtttcggtga tgacggtgaa
1741 aacctctgac acatgcagct cccggagacg gtcacagctt gtctgtaagc ggatgccggg
1801 agcagacaag cccgtcaggg cgcgtcagcg ggtgttggcg ggtgtcgggg cgcagccatg
1861 acccagtcac gtagcgatag cggagtgtat actggcttaa ctatgcggca tcagagcaga
1921 ttgtactgag agtgcaccat atgcggtgtg aaataccgca cagatgcgta aggagaaaat
1981 accgcatcag gcgctcttcc gcttcctcgc tcactgactc gctgcgctcg gtcgttcggc
2041 tgcggcgagc ggtatcagct cactcaaagg cggtaatacg gttatccaca gaatcagggg
2101 ataacgcagg aaagaacatg tgagcaaaag gccagcaaaa ggccaggaac cgtaaaaagg
2161 ccgcgttgct ggcgtttttc cataggctcc gcccccctga cgagcatcac aaaaatcgac
2221 gctcaagtca gaggtggcga aacccgacag gactataaag ataccaggcg tttccccctg
2281 gaagctccct cgtgcgctct cctgttccga ccctgccgct taccggatac ctgtccgcct
2341 ttctcccttc gggaagcgtg gcgctttctc atagctcacg ctgtaggtat ctcagttcgg
2401 tgtaggtcgt tcgctccaag ctgggctgtg tgcacgaacc ccccgttcag cccgaccgct
2461 gcgccttatc cggtaactat cgtcttgagt ccaacccggt aagacacgac ttatcgccac
2521 tggcagcagc cactggtaac aggattagca gagcgaggta tgtaggcggt gctacagagt
2581 tcttgaagtg gtggcctaac tacggctaca ctagaaggac agtatttggt atctgcgctc
2641 tgctgaagcc agttaccttc ggaaaaagag ttggtagctc ttgatccggc aaacaaacca
2701 ccgctggtag cggtggtttt tttgtttgca agcagcagat tacgcgcaga aaaaaaggat
2761 ctcaagaaga tcctttgatc ttttctacgg ggtctgacgc tcagtggaac gaaaactcac
2821 gttaagggat tttggtcatg agattatcaa aaaggatctt cacctagatc cttttaaatt
2881 aaaaatgaag ttttaaatca atctaaagta tatatgagta aacttggtct gacagttacc
2941 aatgcttaat cagtgaggca cctatctcag cgatctgtct atttcgttca tccatagttg
3001 cctgactccc cgtcgtgtag ataactacga tacgggaggg cttaccatct ggccccagtg
3061 ctgcaatgat accgcgagac ccacgctcac cggctccaga tttatcagca ataaaccagc
3121 cagccggaag ggccgagcgc agaagtggtc ctgcaacttt atccgcctcc atccagtcta
3181 ttaattgttg ccgggaagct agagtaagta gttcgccagt taatagtttg cgcaacgttg
3241 ttgccattgc tgcaggcatc gtggtgtcac gctcgtcgtt tggtatggct tcattcagct
3301 ccggttccca acgatcaagg cgagttacat gatcccccat gttgtgcaaa aaagcggtta
3361 gctccttcgg tcctccgatc gttgtcagaa gtaagttggc cgcagtgtta tcactcatgg
3421 ttatggcagc actgcataat tctcttactg tcatgccatc cgtaagatgc ttttctgtga
3481 ctggtgagta ctcaaccaag tcattctgag aatagtgtat gcggcgaccg agttgctctt
3541 gcccggcgtc aacacgggat aataccgcgc cacatagcag aactttaaaa gtgctcatca
3601 ttggaaaacg ttcttcgggg cgaaaactct caaggatctt accgctgttg agatccagtt
3661 cgatgtaacc cactcgtgca cccaactgat cttcagcatc ttttactttc accagcgttt
3721 ctgggtgagc aaaaacagga aggcaaaatg ccgcaaaaaa gggaataagg gcgacacgga
3781 aatgttgaat actcatactc ttcctttttc aatattattg aagcatttat cagggttatt
3841 gtctcatgag cggatacata tttgaatgta tttagaaaaa taaacaaata ggggttccgc
3901 gcacatttcc ccgaaaagtg ccacctgacg tctaagaaac cattattatc atgacattaa
3961 cctataaaaa taggcgtatc acgaggccct ttcgtcttca agaattggat ccagacatga
4021 taagatacat tgatgagttt ggacaaacca caactagaat gcagtgaaaa aaatgcttta
4081 tttgtgaaat ttgtgatgct attgctttat ttgtaaccat tataagctgc aataaacaag
4141 ttaacaacaa caattgcatt cattttatgt ttcaggttca gggggaggtg tgggaggttt
4201 tttaaagcaa gtaaaacctc tacaaatgtg gtatggctga ttatgatctc tagtcaaggc
4261 actatacatc aaatattcct tattaacccc tttacaaatt aaaaagctaa aggtacacaa
4321 tttttgagca tagttattaa tagcagacac tctatgcctg tgtggagtaa gaaaaaacag
4381 tatgttatga ttataactgt tatgcctact tataaaggtt acagaatatt tttccataat
4441 tttcttgtat agcagtgcag ctttttcctt tgtggtgtaa atagcaaagc aagcaagagt
4501 tctattacta aacacagcat gactcaaaaa acttagcaat tctgaaggaa agtccttggg
4561 gtcttctacc tttctcttct tttttggagg agtagaatgt tgagagtcag cagtagcctc
4621 atcatcacta gatggcattt cttctgagca aaacaggttt tcctcattaa aggcattcca
4681 ccactgctcc cattcatcag ttccataggt tggaatctaa aatacacaaa caattagaat
4741 cagtagttta acacattata cacttaaaaa ttttatattt accttagagc tttaaatctc
4801 tgtaggtagt ttgtccaatt atgtcacacc acagaagtaa ggttccttca caaagatccg
4861 gcgaatttct gccattcatc cgcttattat cacttattca ggcgtagcac caggcgttta
4921 agggcaccaa taactgcctt aaaaaaatta cgccccgccc tgccactcat cgcagtactg
4981 ttgtaattca ttaagcattc tgccgacatg gaagccatca cagacggcat gatgaacctg
5041 aatcgccagc ggcatcagca ccttgtcgcc ttgcgtataa tatttgccca tggtgaaaac
5101 gggggcgaag aagttgtcca tattggccac gtttaaatca aaactggtga aactcaccca
5161 gggattggct gagacgaaaa acatattctc aataaaccct ttagggaaat aggccaggtt
5221 ttcaccgtaa cacgccacat cttgcgaata tatgtgtaga aactgccgga aatcgtcgtg
5281 gtattcactc cagagcgatg aaaacgtttc agtttgctca tggaaaacgg tgtaacaagg
5341 gtgaacacta tcccatatca ccagctcacc gtctttcatt gccatacgga attccggatg
5401 agcattcatc aggcgggcaa gaatgtgaat aaaggccgga taaaacttgt gcttattttt
5461 ctttacggtc tttaaaaagg ccgtaatatc cagctgaacg gtctggttat aggtacattg
5521 agcaactgac tgaaatgcct caaaatgttc tttacgatgc cattgggata tatcaacggt
5581 ggtatatcca gtgatttttt tctccatttt agcttcctta gctcctgaaa atctcgcc
//